DOI: 10.1098/rsta.2021.0127
Terbit pada 22 November 2021 Pada Philosophical Transactions of the Royal Society A

Data science approaches to confronting the COVID-19 pandemic: a narrative review

Daniel Dajun Zeng Jianxi Gao Joseph T. Wu + 2 penulis

Abstrak

During the COVID-19 pandemic, more than ever, data science has become a powerful weapon in combating an infectious disease epidemic and arguably any future infectious disease epidemic. Computer scientists, data scientists, physicists and mathematicians have joined public health professionals and virologists to confront the largest pandemic in the century by capitalizing on the large-scale ‘big data’ generated and harnessed for combating the COVID-19 pandemic. In this paper, we review the newly born data science approaches to confronting COVID-19, including the estimation of epidemiological parameters, digital contact tracing, diagnosis, policy-making, resource allocation, risk assessment, mental health surveillance, social media analytics, drug repurposing and drug development. We compare the new approaches with conventional epidemiological studies, discuss lessons we learned from the COVID-19 pandemic, and highlight opportunities and challenges of data science approaches to confronting future infectious disease epidemics. This article is part of the theme issue ‘Data science approaches to infectious disease surveillance’.

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Leveraging Data Science to Combat COVID-19: A Comprehensive Review

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P. Embí A. Wiensch U. Tachinardi + 6 lainnya

22 Januari 2021

OBJECTIVE To support public health surveillance and response to COVID-19 through rapid development and implementation of novel visualization applications for data amalgamated across sectors. MATERIALS AND METHODS We developed and implemented population-level dashboards that collate information on individuals tested for and infected with COVID-19, in partnership with state and local public health agencies as well as health systems. The dashboards are deployed on top of a statewide health information exchange. One dashboard enables authorized users working in public health agencies to surveil populations in detail, and a public version provides higher-level situational awareness to inform ongoing pandemic response efforts in communities. RESULTS Both dashboards have proved useful informatics resources. For example, the private dashboard enabled detection of a local community outbreak associated with a meat packing plant. The public dashboard provides recent trend analysis to track disease spread and community-level hospitalizations. Combined, the tools were utilized 133,637 times by 74,317 distinct users between June 21 and August 22, 2020. The tools are frequently cited by journalists and featured on social media. DISCUSSION Capitalizing on a statewide health information exchange, in partnership with health system and public health leaders, Regenstrief biomedical informatics experts rapidly developed and deployed informatics tools to support surveillance and response to COVID-19. CONCLUSION The application of public health informatics methods and tools in Indiana holds promise for other states and nations. Yet development of infrastructure and partnerships will require effort and investment after the current pandemic in preparation for the next public health emergency.

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